End-to-End Microbiome Platform with AI Prediction Models

Our integrated platform connects laboratories, bioinformatics, AI and clinical science to deliver actionable microbiome results.

Laboratory integration

BiomeDx integrates seamlessly into laboratory workflows through multiple connection methods: API, sFTP, Illumina BaseSpace and other sequencer connectors.
This ensures compatibility with 99% of existing laboratory systems, enabling instant onboarding without technical overhead.

Quality control

Each sequencing read undergoes rigorous preprocessing and quality control to ensure the highest analytical accuracy. Our pipeline filters out low-quality reads, contaminants, and sequencing artifacts using multiple validation criteria.

Taxonomic and functional analysis

The result is a high-resolution, standardized dataset linking microbial composition with metabolic and health features — a foundation for precision preventive analysis.

BiomeDx^® Predictor

Predicts the likelihood of 18 clinically relevant conditions. Over 80,000 models are trained per year with validated biomarkers and 80%+ sensitivity.
This enables early identification of risk patterns and personalized preventive strategies.

BiomeDx^® Recommender

Recommendation engine combines microbiome results with lifestyle and nutrition data to generate individualized recommendations.
These include dietary guidance, recipe suggestions, and targeted lifestyle changes.

Results delivery

Each report provides clear, preventive guidance — highlighting key risk areas, microbial imbalances, and actionable next steps, empowering customers to make informed health decisions.

BiomeDx^® Agent

Our conversational AI "Mika" trained on over 200,000 scientific publications allows customers and healthcare providers to explore results interactively, ask follow-up questions, and receive science-backed recommendations.

Diving deeper into our AI platform: Predictor, Recommender and Agent — the three core components driving preventive insights.

BiomeDx^® Predictor

The BiomeDx Predictor combines over 120 health data points — including diet, lifestyle, and clinical metrics — with microbiome sequencing data to uncover links between the gut and health outcomes.

Using neural networks, random forests, and gradient boosting models, it identifies complex microbial patterns with high precision.

Each model is rigorously cross-validated and continuously retrained on our growing dataset, ensuring reliable, generalizable predictions that power truly preventive and personalized health insights.

Overview of the covered clinically relevant conditions

Cancer immunotherapy response prediction

European medical device (CE-IVD)

Colorectal cancer

Inflammatory potential

Psoarisis

Acne

Neurodermatitis

Over- and underweight

Leaky gut syndrome

Irritable bowel syndrome

SIBO

Gluten sensitivity

Mental well-being

Physical well-being

Blood sugar regulation

Blood pressure regulation

Gut-liver axis

Hypothyroidism

Hyperthyroidism

BiomeDx^®
Recommender

The BiomeDx Recommender transforms predictive insights into practical, evidence-based actions. It integrates each user’s microbiome profile with their health questionnaire data — including factors like lactose intolerance, dietary habits, and lifestyle — to generate personalized nutrition and lifestyle recommendations.

Every suggestion is scientifically derived and verified by certified nutritionists, ensuring accuracy, safety, and real-world applicability.

By bridging AI-driven analysis with expert validation, the BiomeDx Recommender empowers users and partners to translate complex microbiome science into clear, preventive guidance.

Introducing Mika, our interactive microbiome BiomeDx^® Agent.
‍Trained on over 200,000 scientific publications, Mika allows users and healthcare providers to explore results, ask questions, and receive instant, science-backed answers.

Create a two-week meal plan for me based on my microbiome report.

Preparing meal plan

Mika

I’ll scan your microbiome report, intolerances from your questionnaire, latest high-impact research on microbiome focused nutrition and generate you a personalized meal plan.

Parsing your microbiome report and health profile

14-Day Gut Health Nutrition Plan

This plan is designed to address imbalances identified in your microbiome report, specifically focusing on reducing the risk of IBS symptoms, while strictly adhering to your stated allergies (histamine intolerance):

Our technology powers multiple products and partner solutions — from consumer health apps to clinical diagnostics — demonstrating its versatility and scalability across the preventive health ecosystem.

myBioma, an award-winning microbiome brand and European market leader, brings the BiomeDx AI platform directly to consumers, turning microbiome data into clear, personalized health insights. It empowers individuals to take preventive action through science-based nutrition and lifestyle guidance.

Visit myBioma

BiomeOne is a clinical-grade microbiome test that predicts patient's response to immunotherapy using a stool sample. Built on BiomeDx's validated AI technology, it delivers actionable insights for oncologists to support more informed treatment decisions.

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Intended use

Sample report

Science you can trust.

BiomeDx’s technology is backed by extensive research and clinical validation. Our findings have been published in 13+ peer-reviewed papers across leading journals including Nature Portfolio, Gut Microbes, and Frontiers in Microbiology.

We are also the only microbiome diagnostics company globally certified to ISO 9001 & ISO 13485, ensuring medical-grade quality standards.

Assessing the Performance of a Novel Stool-Based Microbiome Test That Predicts Response to First Line Immune Checkpoint Inhibitors in Multiple Cancer Types

CANCERS

Using fecal immmunochemical cartridges for gut microbiome analysis within a colorectal cancer screening program

GUT MICROBES

Characteristics of Gut Microbiota in Rosacea Patients-A Cross-Sectional, Controlled Pilot Study

Life

Explore our research

Visit our newsroom

BiomeDx turns raw microbiome sequencing data into fast, predictive health insights through an end-to-end AI platform, delivering clear, preventive guidance.